Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| triose-phosphate isomerase | CD58_RS04030 | Not Available | Positive | 972691 - 973446 | 26017.4 |
| preprotein translocase subunit secg | CD58_RS04035 | Not Available | Positive | 973451 - 973834 | 13022.6 |
| Trna-leu | Not Available | Not Available | Positive | 973856 - 973941 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 974039 - 974115 | Not Available |
| ribosome maturation factor rimp | CD58_RS04050 | Not Available | Positive | 974256 - 974714 | 16971.3 |
| transcription termination factor nusa | CD58_RS04055 | Not Available | Positive | 974774 - 976255 | 54443.8 |
| translation initiation factor if-2 | CD58_RS04060 | Not Available | Positive | 976283 - 978811 | 90870.6 |
| 30s ribosome-binding factor rbfa | CD58_RS04065 | Not Available | Positive | 978971 - 979372 | 14934.9 |
| trna pseudouridine(55) synthase trub | CD58_RS04070 | Not Available | Positive | 979377 - 980294 | 33387.0 |
| 30s ribosomal protein s15 | CD58_RS04075 | Not Available | Positive | 980434 - 980703 | 10089.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
