Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate reductase | CD58_RS03980 | Not Available | Positive | 960794 - 961600 | 28521.7 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | CD58_RS03985 | Not Available | Positive | 961857 - 962993 | 40657.5 |
| carbamoyl-phosphate synthase large subunit | CD58_RS03990 | Not Available | Positive | 963098 - 966319 | 117515.0 |
| transcription elongation factor grea | CD58_RS03995 | Not Available | Positive | 966322 - 966798 | 17331.8 |
| hypothetical protein | CD58_RS04000 | Not Available | Positive | 966827 - 967231 | 14725.7 |
| yhby family rna-binding protein | CD58_RS04005 | Not Available | Negative | 967242 - 967550 | 11459.2 |
| 23s rrna (uridine(2552)-2'-o)-methyltransferase rlme | CD58_RS04010 | Not Available | Positive | 967657 - 968307 | 24114.1 |
| atp-dependent zinc metalloprotease ftsh | CD58_RS04015 | Not Available | Positive | 968500 - 970410 | 68980.3 |
| dihydropteroate synthase | CD58_RS04020 | Not Available | Positive | 970419 - 971270 | 30073.5 |
| phosphoglucosamine mutase | CD58_RS04025 | Not Available | Positive | 971287 - 972624 | 47529.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
