Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssra-binding protein smpb | CD58_RS03930 | Not Available | Negative | 950919 - 951401 | 18255.0 |
| sodium-dependent transporter | CD58_RS03935 | Not Available | Positive | 951520 - 952923 | 50895.5 |
| type ii toxin-antitoxin system rata family toxin | CD58_RS03940 | Not Available | Positive | 952931 - 953374 | 16282.5 |
| rnfh family protein | CD58_RS03945 | Not Available | Positive | 953371 - 953673 | 10989.3 |
| outer membrane protein assembly factor bame | CD58_RS03950 | Not Available | Negative | 953733 - 954260 | 19365.1 |
| ferric iron uptake transcriptional regulator | CD58_RS03955 | Not Available | Positive | 954358 - 954762 | 15359.5 |
| dna repair protein recn | CD58_RS03960 | Not Available | Negative | 954838 - 956511 | 61255.7 |
| nucleotide exchange factor grpe | CD58_RS03965 | Not Available | Positive | 956752 - 957318 | 20996.7 |
| molecular chaperone dnak | CD58_RS03970 | Not Available | Positive | 957421 - 959337 | 68314.3 |
| molecular chaperone dnaj | CD58_RS03975 | Not Available | Positive | 959660 - 960784 | 40234.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
