Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Gp01 | CD58_RS17790 | Not Available | Positive | 4218939 - 4219301 | 13762.3 |
| Attr | Not Available | Not Available | Positive | 4219589 - 4219605 | Not Available |
| hypothetical protein | CD58_RS17795 | Not Available | Negative | 4219676 - 4220230 | 19539.6 |
| transposase | CD58_RS30585 | Not Available | Positive | 4220356 - 4220463 | 3966.87 |
| Hypothetical protein | CD58_RS30590 | Not Available | Negative | 4220553 - 4220966 | 14776.7 |
| chromosomal replication initiator protein dnaa | CD58_RS00005 | Not Available | Positive | 132 - 1652 | 56822.9 |
| dna polymerase iii subunit beta | CD58_RS00010 | Not Available | Positive | 1692 - 2795 | 40446.8 |
| dna replication/repair protein recf | CD58_RS00015 | Not Available | Positive | 2816 - 3919 | 41577.9 |
| dna topoisomerase (atp-hydrolyzing) subunit b | CD58_RS00020 | Not Available | Positive | 3925 - 6342 | 90206.3 |
| gaba permease | CD58_RS00025 | Not Available | Positive | 6648 - 8042 | 49529.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
