Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS03885 | Not Available | Positive | 939324 - 939593 | 10708.2 |
| integrase domain-containing protein | CD58_RS03890 | Not Available | Negative | 939760 - 941016 | 47556.5 |
| Tmrna,resume consensus sequence (at 90): tatagttgccaatgacga | Not Available | Not Available | Positive | 941203 - 941596 | Not Available |
| hypothetical protein | CD58_RS03895 | Not Available | Negative | 941692 - 941982 | 10180.1 |
| fad-binding and (fe-s)-binding domain-containing protein | CD58_RS03900 | Not Available | Negative | 942080 - 944947 | 104833.0 |
| lactate utilization protein c | CD58_RS03905 | Not Available | Negative | 944944 - 945615 | 24912.9 |
| lutb/lldf family l-lactate oxidation iron-sulfur protein | CD58_RS03910 | Not Available | Negative | 945612 - 947069 | 53832.7 |
| (fe-s)-binding protein | CD58_RS03915 | Not Available | Negative | 947066 - 947890 | 30097.9 |
| lactate permease lctp family transporter | CD58_RS03920 | Not Available | Negative | 948041 - 949735 | 59478.8 |
| fcd domain-containing protein | CD58_RS03925 | Not Available | Positive | 949999 - 950766 | 28949.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
