Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate abc transporter atp-binding protein | CD58_RS03830 | Not Available | Positive | 921929 - 922783 | 31469.0 |
| amp-binding protein | CD58_RS28735 | Not Available | Positive | 922864 - 924429 | 56334.1 |
| outer membrane lipoprotein-sorting protein | CD58_RS03840 | Not Available | Positive | 924440 - 927652 | 116857.0 |
| hypothetical protein | CD58_RS03845 | Not Available | Positive | 927662 - 928906 | 46106.0 |
| arsenate reductase arsc | CD58_RS03850 | Not Available | Positive | 929160 - 929630 | 16332.6 |
| restriction endonuclease | CD58_RS03860 | Not Available | Positive | 930461 - 932734 | 86232.6 |
| atp-dependent nuclease | CD58_RS03865 | Not Available | Positive | 933466 - 935301 | 70073.5 |
| yfji family protein | CD58_RS03870 | Not Available | Positive | 936617 - 938023 | 52243.8 |
| hypothetical protein | CD58_RS03875 | Not Available | Positive | 938010 - 938363 | 13110.5 |
| integrase domain-containing protein | CD58_RS03880 | Not Available | Positive | 938347 - 939327 | 36518.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
