Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | CD58_RS03780 | Not Available | Positive | 912616 - 913533 | 33308.4 |
| helix-turn-helix transcriptional regulator | CD58_RS03785 | Not Available | Negative | 913750 - 914433 | 25086.1 |
| hypothetical protein | CD58_RS28730 | Not Available | Negative | 914559 - 915623 | 38739.5 |
| sdr family oxidoreductase | CD58_RS03795 | Not Available | Negative | 915610 - 916818 | 45041.3 |
| hypothetical protein | CD58_RS03800 | Not Available | Negative | 916815 - 917249 | 15254.3 |
| permease | CD58_RS03805 | Not Available | Negative | 917274 - 918203 | 32373.9 |
| long-chain fatty aldehyde decarbonylase | CD58_RS03810 | Not Available | Negative | 918244 - 919092 | 31486.7 |
| phosphate abc transporter substrate-binding protein | CD58_RS03815 | Not Available | Positive | 919251 - 920129 | 31335.7 |
| phosphate abc transporter permease subunit pstc | CD58_RS03820 | Not Available | Positive | 920160 - 921056 | 31582.9 |
| phosphate abc transporter permease psta | CD58_RS03825 | Not Available | Positive | 921053 - 921928 | 30863.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
