Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-aminocyclopropane-1-carboxylate deaminase | CD58_RS03730 | Not Available | Positive | 899719 - 900735 | 36801.2 |
| hypothetical protein | CD58_RS28965 | Not Available | Positive | 900873 - 901436 | 20837.0 |
| alpha-ketoglutarate dehydrogenase | CD58_RS03740 | Not Available | Positive | 901433 - 904129 | 99288.9 |
| m20 family metallopeptidase | CD58_RS03745 | Not Available | Negative | 904384 - 905538 | 40199.1 |
| m20 family metallopeptidase | CD58_RS03750 | Not Available | Negative | 905535 - 906959 | 51655.2 |
| abc transporter atp-binding protein | CD58_RS03755 | Not Available | Negative | 906956 - 907945 | 36269.4 |
| abc transporter atp-binding protein | CD58_RS03760 | Not Available | Negative | 907942 - 908958 | 36953.3 |
| abc transporter permease | CD58_RS03765 | Not Available | Negative | 908975 - 909877 | 32140.4 |
| abc transporter permease | CD58_RS03770 | Not Available | Negative | 909887 - 910804 | 33076.6 |
| abc transporter substrate-binding protein | CD58_RS03775 | Not Available | Negative | 910909 - 912429 | 56331.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
