Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imm6 family immunity protein | CD58_RS03680 | Not Available | Positive | 889574 - 890041 | 17215.5 |
| hypothetical protein | CD58_RS03685 | Not Available | Positive | 890201 - 890776 | 21045.2 |
| duf600 family protein | CD58_RS03690 | Not Available | Positive | 891125 - 891427 | 11439.5 |
| hypothetical protein | CD58_RS03695 | Not Available | Negative | 892014 - 892286 | 10067.2 |
| hypothetical protein | CD58_RS03700 | Not Available | Positive | 892774 - 894255 | 53922.8 |
| higa family addiction module antitoxin | CD58_RS03705 | Not Available | Negative | 894374 - 894679 | 11146.6 |
| tonb-dependent siderophore receptor | CD58_RS03710 | Not Available | Negative | 894847 - 897219 | 86315.8 |
| duf4880 domain-containing protein | CD58_RS03715 | Not Available | Negative | 897341 - 898324 | 36550.1 |
| sigma-70 family rna polymerase sigma factor | CD58_RS03720 | Not Available | Negative | 898311 - 898826 | 19885.1 |
| lrp/asnc family transcriptional regulator | CD58_RS03725 | Not Available | Negative | 899011 - 899520 | 18706.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
