Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6124 family protein | CD58_RS03640 | Not Available | Positive | 874571 - 874912 | 12156.5 |
| hemagglutinin repeat-containing protein | CD58_RS03645 | Not Available | Positive | 875345 - 884599 | 319325.0 |
| hypothetical protein | CD58_RS03650 | Not Available | Positive | 884614 - 885069 | 17328.0 |
| hypothetical protein | CD58_RS29915 | Not Available | Positive | 885344 - 885682 | 12672.1 |
| hypothetical protein | CD58_RS03655 | Not Available | Positive | 885687 - 886502 | 29768.2 |
| hypothetical protein | CD58_RS03660 | Not Available | Positive | 886640 - 887074 | 16127.3 |
| hypothetical protein | CD58_RS03665 | Not Available | Positive | 887138 - 887704 | 21128.5 |
| hypothetical protein | CD58_RS29920 | Not Available | Positive | 887889 - 888320 | 15800.9 |
| metal abc transporter atp-binding protein | CD58_RS03670 | Not Available | Negative | 888370 - 888807 | 16562.7 |
| hypothetical protein | CD58_RS03675 | Not Available | Positive | 889082 - 889444 | 14011.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
