Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| neuraminidase-like domain-containing protein | CD58_RS03545 | Not Available | Negative | 843915 - 847673 | 141854.0 |
| tc toxin subunit a | CD58_RS03550 | Not Available | Negative | 847708 - 850239 | 93208.8 |
| fita-like ribbon-helix-helix domain-containing protein | CD58_RS31355 | Not Available | Positive | 850480 - 850707 | 8277.93 |
| methyl-accepting chemotaxis protein | CD58_RS03560 | Not Available | Negative | 850831 - 852750 | 68723.6 |
| histidine phosphatase family protein | CD58_RS03565 | Not Available | Positive | 853014 - 853685 | 24374.4 |
| phosphatase pap2 family protein | CD58_RS03570 | Not Available | Positive | 853710 - 854558 | 32452.8 |
| catalase/peroxidase hpi | CD58_RS03575 | Not Available | Negative | 854709 - 856973 | 82452.7 |
| hypothetical protein | CD58_RS03580 | Not Available | Positive | 857342 - 857932 | 21530.0 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | CD58_RS03585 | Not Available | Positive | 858225 - 859931 | 63433.5 |
| duf637 domain-containing protein | CD58_RS03590 | Not Available | Positive | 859971 - 867347 | 256188.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
