Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | CD58_RS03500 | Not Available | Positive | 828590 - 829501 | 33687.2 |
| nad-dependent epimerase/dehydratase family protein | CD58_RS03505 | Not Available | Positive | 829604 - 830497 | 31586.6 |
| sulp family inorganic anion transporter | CD58_RS03510 | Not Available | Negative | 830646 - 832091 | 51540.8 |
| gluconate:h+ symporter | CD58_RS03515 | Not Available | Positive | 832426 - 833775 | 47397.8 |
| murr/rpir family transcriptional regulator | CD58_RS03520 | Not Available | Positive | 833803 - 834663 | 30992.3 |
| n-acyl-d-amino-acid deacylase family protein | CD58_RS03525 | Not Available | Positive | 834665 - 836137 | 52993.7 |
| glyoxalase superfamily protein | CD58_RS03530 | Not Available | Positive | 836274 - 836642 | 13857.5 |
| rhs repeat-associated core domain-containing protein | CD58_RS03535 | Not Available | Negative | 836649 - 839438 | 104249.0 |
| toxin tcdb middle/c-terminal domain-containing protein | CD58_RS03540 | Not Available | Negative | 839435 - 842449 | 112529.0 |
| spvb/tcac n-terminal domain-containing protein | CD58_RS31640 | Not Available | Negative | 842407 - 843918 | 56545.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
