Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine aldolase family protein | CD58_RS03450 | Not Available | Positive | 819171 - 820232 | 38913.5 |
| hypothetical protein | CD58_RS03455 | Not Available | Positive | 820229 - 821533 | 49246.7 |
| mfs transporter | CD58_RS03460 | Not Available | Positive | 821530 - 822738 | 43179.9 |
| aminotransferase class v-fold plp-dependent enzyme | CD58_RS03465 | Not Available | Positive | 822742 - 823857 | 40558.6 |
| guanitoxin biosynthesis l-arginine gamma (s) hydroxylase | CD58_RS03470 | Not Available | Positive | 824056 - 825042 | 38014.9 |
| cupin domain-containing protein | CD58_RS03475 | Not Available | Negative | 825118 - 825462 | 13127.8 |
| lysr substrate-binding domain-containing protein | CD58_RS03480 | Not Available | Negative | 825561 - 826442 | 31641.2 |
| sulfite exporter taue/safe family protein | CD58_RS03485 | Not Available | Positive | 826656 - 827420 | 26182.4 |
| putative quinol monooxygenase | CD58_RS03490 | Not Available | Negative | 827410 - 827724 | 12374.7 |
| nad(p)h-dependent oxidoreductase | CD58_RS03495 | Not Available | Positive | 827923 - 828513 | 22104.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
