Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| impact family protein | CD58_RS03350 | Not Available | Negative | 791346 - 791927 | 20810.8 |
| tetr/acrr family transcriptional regulator | CD58_RS03355 | Not Available | Negative | 791935 - 792585 | 24254.0 |
| lysr family transcriptional regulator | CD58_RS03360 | Not Available | Negative | 792713 - 793633 | 34096.0 |
| aspartate aminotransferase family protein | CD58_RS03365 | Not Available | Positive | 793787 - 795106 | 47568.1 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | CD58_RS03370 | Not Available | Positive | 795178 - 796671 | 53348.2 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 797297 - 798833 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 798899 - 798975 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 799003 - 799078 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 799334 - 802225 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 802393 - 802508 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
