Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bmp family abc transporter substrate-binding protein | CD58_RS03305 | Not Available | Negative | 781381 - 782463 | 39262.8 |
| calcium:proton antiporter | CD58_RS03310 | Not Available | Positive | 782756 - 783847 | 38928.9 |
| 8-oxoguanine deaminase | CD58_RS03315 | Not Available | Negative | 783973 - 785331 | 49112.0 |
| metal abc transporter atp-binding protein | CD58_RS31350 | Not Available | Negative | 785479 - 785577 | 3323.05 |
| sdr family oxidoreductase | CD58_RS03320 | Not Available | Negative | 785581 - 786267 | 24037.8 |
| merr family transcriptional regulator | CD58_RS03325 | Not Available | Negative | 786292 - 786642 | 12971.7 |
| hypothetical protein | CD58_RS03330 | Not Available | Positive | 786723 - 787160 | 16230.0 |
| abc transporter permease | CD58_RS03335 | Not Available | Negative | 787213 - 788139 | 32513.0 |
| abc transporter permease | CD58_RS03340 | Not Available | Negative | 788139 - 789245 | 39468.6 |
| abc transporter atp-binding protein | CD58_RS03345 | Not Available | Negative | 789258 - 790811 | 55930.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
