Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS03260 | Not Available | Negative | 772170 - 772553 | 13744.8 |
| heavy-metal-associated domain-containing protein | CD58_RS03265 | Not Available | Positive | 772702 - 772899 | 6835.18 |
| multidrug effflux mfs transporter | CD58_RS03270 | Not Available | Positive | 772995 - 774197 | 41709.2 |
| hypothetical protein | CD58_RS31180 | Not Available | Negative | 774199 - 774369 | 6479.74 |
| zinc-binding alcohol dehydrogenase family protein | CD58_RS03275 | Not Available | Negative | 774623 - 775636 | 36237.6 |
| lysr family transcriptional regulator | CD58_RS03280 | Not Available | Positive | 775750 - 776679 | 33999.1 |
| arsr/smtb family transcription factor | CD58_RS03285 | Not Available | Positive | 776902 - 777633 | 26140.8 |
| mfs transporter | CD58_RS03290 | Not Available | Positive | 777731 - 779113 | 50113.0 |
| adenosine deaminase | CD58_RS03295 | Not Available | Negative | 779232 - 780185 | 36087.9 |
| 2-oxoglutarate and iron-dependent oxygenase domain-containing protein | CD58_RS03300 | Not Available | Negative | 780269 - 781234 | 36253.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
