Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4136 domain-containing protein | CD58_RS03210 | Not Available | Positive | 760478 - 761095 | 22619.3 |
| duf4136 domain-containing protein | CD58_RS03215 | Not Available | Positive | 761116 - 761673 | 20978.7 |
| maoc family dehydratase | CD58_RS03220 | Not Available | Negative | 761801 - 762655 | 30792.3 |
| 3-oxoacyl-acp reductase | CD58_RS03225 | Not Available | Negative | 762658 - 764010 | 47444.2 |
| acetyl-coa c-acetyltransferase | CD58_RS03230 | Not Available | Positive | 764154 - 765431 | 45643.1 |
| bile acid:sodium symporter family protein | CD58_RS03235 | Not Available | Negative | 765418 - 766446 | 36936.4 |
| arac family transcriptional regulator | CD58_RS03240 | Not Available | Positive | 766526 - 767317 | 29691.5 |
| pa4780 family rio1-like protein kinase | CD58_RS03245 | Not Available | Positive | 767543 - 768436 | 33061.5 |
| cu(i)-responsive transcriptional regulator | CD58_RS03250 | Not Available | Negative | 769257 - 769670 | 15415.5 |
| heavy metal translocating p-type atpase | CD58_RS03255 | Not Available | Negative | 769667 - 772060 | 84018.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
