Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2333 family protein | CD58_RS03160 | Not Available | Positive | 750685 - 751752 | 39266.5 |
| nudix hydrolase | CD58_RS03165 | Not Available | Positive | 751756 - 752313 | 20587.3 |
| translation initiation factor sui1 | CD58_RS03170 | Not Available | Positive | 752482 - 752853 | 12787.6 |
| arginine decarboxylase | CD58_RS03175 | Not Available | Positive | 753065 - 754978 | 71040.3 |
| type vi secretion system vgr family protein | CD58_RS03180 | Not Available | Positive | 755250 - 756572 | 47680.9 |
| duf4123 domain-containing protein | CD58_RS03185 | Not Available | Positive | 756569 - 757366 | 30166.0 |
| mate family efflux transporter | CD58_RS03190 | Not Available | Negative | 757371 - 758720 | 48249.9 |
| hypothetical protein | CD58_RS03195 | Not Available | Negative | 758956 - 759249 | 10657.5 |
| mazg-like family protein | CD58_RS03200 | Not Available | Positive | 759414 - 759719 | 11564.9 |
| methyltransferase | CD58_RS03205 | Not Available | Positive | 759716 - 760465 | 28101.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
