Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator fis | CD58_RS03110 | Not Available | Negative | 735908 - 736228 | 11718.1 |
| trna dihydrouridine synthase dusb | CD58_RS03115 | Not Available | Negative | 736225 - 737232 | 36204.7 |
| duf3426 domain-containing protein | CD58_RS03120 | Not Available | Negative | 737417 - 738655 | 46455.5 |
| 50s ribosomal protein l11 methyltransferase | CD58_RS03125 | Not Available | Negative | 738686 - 739564 | 31615.4 |
| dermonecrotic toxin domain-containing protein | CD58_RS03130 | Not Available | Positive | 739755 - 743720 | 146184.0 |
| acetyl-coa carboxylase biotin carboxylase subunit | CD58_RS03135 | Not Available | Negative | 743803 - 745164 | 49109.1 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | CD58_RS03140 | Not Available | Negative | 745182 - 745646 | 16370.7 |
| type ii 3-dehydroquinate dehydratase | CD58_RS03145 | Not Available | Negative | 745695 - 746147 | 16358.7 |
| methyl-accepting chemotaxis protein | CD58_RS03150 | Not Available | Negative | 746729 - 748675 | 68971.3 |
| diguanylate cyclase gcba | CD58_RS03155 | Not Available | Negative | 748728 - 750398 | 62867.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
