Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| precorrin-2 c(20)-methyltransferase | CD58_RS03065 | Not Available | Positive | 717461 - 718192 | 26521.2 |
| precorrin-3b c(17)-methyltransferase | CD58_RS03070 | Not Available | Positive | 718189 - 719880 | 59797.9 |
| tcda/tcdb pore-forming domain-containing protein | CD58_RS03075 | Not Available | Positive | 720307 - 725694 | 198634.0 |
| hypothetical protein | CD58_RS31345 | Not Available | Positive | 725883 - 727379 | 54682.2 |
| hypothetical protein | CD58_RS03080 | Not Available | Negative | 727509 - 728168 | 25196.9 |
| hypothetical protein | CD58_RS03085 | Not Available | Positive | 728389 - 729210 | 30282.2 |
| marc family protein | CD58_RS03090 | Not Available | Negative | 729231 - 729827 | 21434.0 |
| hybrid sensor histidine kinase/response regulator | CD58_RS03095 | Not Available | Negative | 729889 - 732663 | 101948.0 |
| phosphoribosylamine--glycine ligase | CD58_RS03100 | Not Available | Negative | 732763 - 734058 | 45545.6 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | CD58_RS03105 | Not Available | Negative | 734217 - 735824 | 57524.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
