Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent copper receptor | CD58_RS03015 | Not Available | Negative | 707470 - 709596 | 76799.6 |
| duf2946 domain-containing protein | CD58_RS03020 | Not Available | Negative | 709680 - 710096 | 14935.1 |
| copper chaperone pcu(a)c | CD58_RS03025 | Not Available | Negative | 710136 - 710615 | 17371.3 |
| duf2946 domain-containing protein | CD58_RS03030 | Not Available | Negative | 710662 - 711066 | 14355.3 |
| metal abc transporter atp-binding protein | CD58_RS31635 | Not Available | Negative | 711386 - 711622 | 8953.59 |
| cobalt-precorrin-6a reductase | CD58_RS03040 | Not Available | Negative | 712122 - 712844 | 26650.2 |
| cobalt-precorrin-5b (c(1))-methyltransferase | CD58_RS03045 | Not Available | Negative | 712856 - 713953 | 37948.7 |
| bifunctional cobalt-precorrin-7 (c(5))-methyltransferase/cobalt-precorrin-6b (c(15))-methyltransferase | CD58_RS03050 | Not Available | Negative | 713946 - 715157 | 43205.6 |
| precorrin-3b synthase | CD58_RS03055 | Not Available | Positive | 715523 - 716842 | 47069.7 |
| precorrin-8x methylmutase | CD58_RS03060 | Not Available | Positive | 716835 - 717461 | 21668.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
