Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | CD58_RS02965 | Not Available | Negative | 697384 - 697917 | 19649.5 |
| gnat family n-acetyltransferase | CD58_RS02970 | Not Available | Negative | 697923 - 698456 | 19617.3 |
| urease subunit gamma | CD58_RS02975 | Not Available | Negative | 698466 - 698768 | 11038.5 |
| urease accessory protein ured | CD58_RS02980 | Not Available | Negative | 698920 - 699771 | 30693.0 |
| urea abc transporter atp-binding subunit urte | CD58_RS02985 | Not Available | Negative | 699802 - 700500 | 25428.3 |
| urea abc transporter atp-binding protein urtd | CD58_RS02990 | Not Available | Negative | 700633 - 701502 | 31239.5 |
| urea abc transporter permease subunit urtc | CD58_RS02995 | Not Available | Negative | 701499 - 702578 | 38788.7 |
| urea abc transporter permease subunit urtb | CD58_RS03000 | Not Available | Negative | 702578 - 704080 | 53275.3 |
| urea abc transporter substrate-binding protein | CD58_RS03005 | Not Available | Negative | 704239 - 705504 | 45994.8 |
| pepsy-associated tm helix domain-containing protein | CD58_RS03010 | Not Available | Negative | 705886 - 707265 | 50975.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
