Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Capsid and scaffold protein | CD58_RS17695 | Not Available | Negative | 4204368 - 4204850 | 17600.9 |
| Putative virion morphogenesis protein | CD58_RS17700 | Not Available | Negative | 4204958 - 4205758 | 29591.3 |
| Putative portal protein | CD58_RS17705 | Not Available | Negative | 4205760 - 4207142 | 51427.3 |
| Putative portal protein | CD58_RS17710 | Not Available | Negative | 4207139 - 4208743 | 59627.2 |
| Pf11985 family protein | CD58_RS17715 | Not Available | Negative | 4208740 - 4209291 | 20384.4 |
| Hypothetical protein | CD58_RS17720 | Not Available | Negative | 4209294 - 4209587 | 10600.8 |
| Pf10805 family protein | CD58_RS17725 | Not Available | Negative | 4209584 - 4209889 | 11558.0 |
| hypothetical protein | CD58_RS17730 | Not Available | Negative | 4209906 - 4210124 | 8164.23 |
| Putative endolysin | CD58_RS17735 | Not Available | Negative | 4210121 - 4210621 | 18516.0 |
| hypothetical protein | CD58_RS30575 | Not Available | Positive | 4211143 - 4212084 | 34059.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
