Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asma family protein | CD58_RS02915 | Not Available | Positive | 686494 - 688569 | 74543.0 |
| bacterioferritin | CD58_RS02920 | Not Available | Negative | 688699 - 689229 | 19982.4 |
| esterase/lipase family protein | CD58_RS02925 | Not Available | Positive | 689424 - 690314 | 32123.5 |
| psif family protein | CD58_RS02930 | Not Available | Positive | 690524 - 690805 | 10060.6 |
| ai-2e family transporter | CD58_RS02935 | Not Available | Positive | 691038 - 692051 | 36853.0 |
| hsp70 family protein | CD58_RS02940 | Not Available | Negative | 692185 - 693459 | 46712.8 |
| dnaj c-terminal domain-containing protein | CD58_RS02945 | Not Available | Positive | 693757 - 694698 | 34100.3 |
| chaperone modulator cbpm | CD58_RS02950 | Not Available | Positive | 694759 - 695058 | 11329.7 |
| urease subunit alpha | CD58_RS02955 | Not Available | Negative | 695236 - 696936 | 60737.7 |
| urease subunit beta | CD58_RS02960 | Not Available | Negative | 697079 - 697387 | 11226.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
