Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | CD58_RS02865 | Not Available | Positive | 677527 - 678399 | 32059.0 |
| abc transporter atp-binding protein | CD58_RS02870 | Not Available | Positive | 678396 - 679112 | 26119.0 |
| sdr family oxidoreductase | CD58_RS02875 | Not Available | Positive | 679970 - 680734 | 27623.1 |
| age family epimerase/isomerase | CD58_RS02880 | Not Available | Negative | 680856 - 681989 | 42205.3 |
| hupe/urej family protein | CD58_RS02885 | Not Available | Negative | 682170 - 682742 | 18886.6 |
| urease accessory protein ureg | CD58_RS02890 | Not Available | Negative | 682774 - 683388 | 21922.5 |
| urease accessory protein uref | CD58_RS02895 | Not Available | Negative | 683398 - 684072 | 25109.8 |
| urease accessory protein uree | CD58_RS02900 | Not Available | Negative | 684069 - 684569 | 18805.2 |
| tetr family transcriptional regulator | CD58_RS02905 | Not Available | Negative | 684850 - 685482 | 23318.5 |
| hypothetical protein | CD58_RS02910 | Not Available | Negative | 685639 - 686106 | 16065.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
