Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00730 family rossman fold protein | CD58_RS02815 | Not Available | Negative | 665747 - 666334 | 20766.0 |
| azurin | CD58_RS02820 | Not Available | Positive | 666676 - 667122 | 15981.3 |
| ammonia-dependent nad(+) synthetase | CD58_RS02825 | Not Available | Negative | 667289 - 668116 | 29781.6 |
| nicotinate phosphoribosyltransferase | CD58_RS02830 | Not Available | Negative | 668121 - 669347 | 47048.9 |
| lysr family transcriptional regulator | CD58_RS02835 | Not Available | Negative | 669581 - 670489 | 34320.1 |
| aldehyde dehydrogenase family protein | CD58_RS02840 | Not Available | Positive | 670668 - 672158 | 53681.9 |
| nad(p)/fad-dependent oxidoreductase | CD58_RS02845 | Not Available | Positive | 672315 - 673598 | 46333.3 |
| branched-chain amino acid abc transporter substrate-binding protein | CD58_RS02850 | Not Available | Positive | 673970 - 675103 | 40033.7 |
| abc transporter permease subunit | CD58_RS02855 | Not Available | Positive | 675329 - 676243 | 32537.9 |
| high-affinity branched-chain amino acid abc transporter permease livm | CD58_RS02860 | Not Available | Positive | 676247 - 677530 | 46067.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
