Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l9 | CD58_RS02765 | Not Available | Positive | 651592 - 652038 | 15453.4 |
| replicative dna helicase | CD58_RS02770 | Not Available | Positive | 652176 - 653573 | 51605.3 |
| ygiq family radical sam protein | CD58_RS02775 | Not Available | Positive | 653824 - 656124 | 85856.1 |
| hypothetical protein | CD58_RS02780 | Not Available | Positive | 656443 - 657363 | 32521.5 |
| duf1614 domain-containing protein | CD58_RS02785 | Not Available | Positive | 657363 - 657821 | 16946.5 |
| duf2126 domain-containing protein | CD58_RS02790 | Not Available | Positive | 657996 - 661289 | 123679.0 |
| metal abc transporter atp-binding protein | CD58_RS02795 | Not Available | Positive | 661516 - 664001 | 90916.9 |
| transglutaminase n-terminal domain-containing protein | CD58_RS02800 | Not Available | Positive | 664001 - 664894 | 33583.1 |
| nudix hydrolase | CD58_RS02805 | Not Available | Positive | 665037 - 665414 | 13794.7 |
| hypothetical protein | CD58_RS02810 | Not Available | Negative | 665487 - 665678 | 6929.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
