Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | CD58_RS02715 | Not Available | Positive | 640485 - 642419 | 67709.9 |
| abc transporter permease | CD58_RS02720 | Not Available | Negative | 642946 - 644511 | 56063.4 |
| extracellular solute-binding protein | CD58_RS02725 | Not Available | Negative | 644511 - 645521 | 36516.6 |
| Trna-leu | Not Available | Not Available | Positive | 645697 - 645783 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 645959 - 646045 | Not Available |
| ribonuclease r | CD58_RS02740 | Not Available | Positive | 646273 - 648891 | 96997.1 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | CD58_RS02745 | Not Available | Positive | 648888 - 649649 | 27206.2 |
| 30s ribosomal protein s6 | CD58_RS02750 | Not Available | Positive | 649956 - 650384 | 16504.9 |
| 30s ribosomal protein s18 | CD58_RS02755 | Not Available | Positive | 650413 - 650643 | 8917.85 |
| hypothetical protein | CD58_RS02760 | Not Available | Positive | 650680 - 651573 | 32102.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
