Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | CD58_RS02665 | Not Available | Positive | 628912 - 629382 | 16983.3 |
| n-acetylmuramoyl-l-alanine amidase | CD58_RS02670 | Not Available | Positive | 629382 - 630812 | 50526.6 |
| dna mismatch repair endonuclease mutl | CD58_RS02675 | Not Available | Positive | 630809 - 632722 | 70175.7 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | CD58_RS02680 | Not Available | Positive | 632722 - 633693 | 35840.2 |
| rna chaperone hfq | CD58_RS02685 | Not Available | Positive | 633785 - 634045 | 9398.38 |
| ribosome rescue gtpase hflx | CD58_RS02690 | Not Available | Positive | 634058 - 635359 | 49148.0 |
| ftsh protease activity modulator hflk | CD58_RS02695 | Not Available | Positive | 635445 - 636617 | 43312.7 |
| protease modulator hflc | CD58_RS02700 | Not Available | Positive | 636617 - 637486 | 32999.4 |
| atp phosphoribosyltransferase regulatory subunit | CD58_RS02705 | Not Available | Positive | 637800 - 638987 | 42873.4 |
| adenylosuccinate synthase | CD58_RS02710 | Not Available | Positive | 639042 - 640334 | 46937.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
