Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| archaetidylserine decarboxylase | CD58_RS02615 | Not Available | Negative | 618353 - 619213 | 31501.2 |
| rhodanese-like domain-containing protein | CD58_RS02620 | Not Available | Negative | 619233 - 620048 | 29589.2 |
| hdod domain-containing protein | CD58_RS02625 | Not Available | Negative | 620091 - 621629 | 57461.7 |
| flagellar motor stator protein mota | CD58_RS02630 | Not Available | Positive | 621797 - 622648 | 30191.1 |
| flagellar motor protein motb | CD58_RS02635 | Not Available | Positive | 622652 - 623689 | 37609.6 |
| small ribosomal subunit biogenesis gtpase rsga | CD58_RS02640 | Not Available | Negative | 623777 - 624808 | 37522.9 |
| oligoribonuclease | CD58_RS02645 | Not Available | Positive | 624918 - 625460 | 20540.4 |
| trimeric intracellular cation channel family protein | CD58_RS02650 | Not Available | Positive | 625689 - 626300 | 22482.4 |
| trna epoxyqueuosine(34) reductase queg | CD58_RS02655 | Not Available | Negative | 626282 - 627361 | 40291.2 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | CD58_RS02660 | Not Available | Positive | 627425 - 628924 | 51507.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
