Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6124 family protein | CD58_RS02565 | Not Available | Positive | 604892 - 605251 | 12811.3 |
| yqia/ycfp family alpha/beta fold hydrolase | CD58_RS02570 | Not Available | Positive | 605767 - 606375 | 22211.3 |
| dna topoisomerase iv subunit b | CD58_RS02575 | Not Available | Positive | 606417 - 608321 | 69402.9 |
| esterase-like activity of phytase family protein | CD58_RS02580 | Not Available | Positive | 608321 - 609307 | 36162.8 |
| tigr02281 family clan aa aspartic protease | CD58_RS02585 | Not Available | Positive | 609304 - 609825 | 18981.9 |
| dna topoisomerase iv subunit a | CD58_RS02590 | Not Available | Positive | 609836 - 612100 | 83359.1 |
| membrane integrity-associated transporter subunit pqic | CD58_RS02595 | Not Available | Positive | 612280 - 612987 | 25300.7 |
| ahpa/ytjb family protein | CD58_RS02600 | Not Available | Negative | 613364 - 614878 | 55808.9 |
| phosphoserine phosphatase serb | CD58_RS02605 | Not Available | Positive | 615012 - 616226 | 43927.0 |
| hypothetical protein | CD58_RS02610 | Not Available | Negative | 616397 - 618157 | 65347.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
