Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | CD58_RS02515 | Not Available | Negative | 593016 - 593348 | 11587.0 |
| lysr family transcriptional regulator | CD58_RS02520 | Not Available | Positive | 593452 - 594342 | 33200.0 |
| lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferase | CD58_RS02525 | Not Available | Positive | 594365 - 595639 | 46946.2 |
| tolc family outer membrane protein | CD58_RS02530 | Not Available | Negative | 595834 - 597273 | 52789.5 |
| phosphomethylpyrimidine synthase thic | CD58_RS02535 | Not Available | Positive | 597715 - 599604 | 69630.0 |
| putative hydroxymethylpyrimidine transporter cytx | CD58_RS02540 | Not Available | Positive | 599775 - 601067 | 44992.1 |
| duf3298 domain-containing protein | CD58_RS02545 | Not Available | Negative | 601036 - 601782 | 27107.5 |
| nudix domain-containing protein | CD58_RS02550 | Not Available | Positive | 601997 - 602614 | 23029.4 |
| duf1249 domain-containing protein | CD58_RS02555 | Not Available | Positive | 602605 - 603057 | 17285.0 |
| metal abc transporter atp-binding protein | CD58_RS02560 | Not Available | Positive | 603181 - 603995 | 30840.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
