Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS17635 | Not Available | Negative | 4190856 - 4191548 | 26387.9 |
| Gp14, phage major tail tube protein | CD58_RS17640 | Not Available | Negative | 4191645 - 4192169 | 19324.3 |
| Major tail sheath protein | CD58_RS17645 | Not Available | Negative | 4192170 - 4193591 | 51237.7 |
| Gp12 | CD58_RS29365 | Not Available | Negative | 4193595 - 4193834 | 8559.52 |
| Gp37 | CD58_RS17650 | Not Available | Negative | 4193831 - 4194313 | 18116.7 |
| Gp10, conserved hypothetical protein | CD58_RS17655 | Not Available | Negative | 4194313 - 4194744 | 16064.1 |
| Major capsid protein | CD58_RS17660 | Not Available | Negative | 4194748 - 4195728 | 35660.6 |
| Hypothetical protein | CD58_RS17665 | Not Available | Negative | 4195742 - 4196110 | 12484.2 |
| Gp32 | CD58_RS17670 | Not Available | Negative | 4196120 - 4196956 | 29258.4 |
| Attl | Not Available | Not Available | Positive | 4195203 - 4195219 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
