Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide kinase inaa family protein | CD58_RS02415 | Not Available | Positive | 569672 - 570424 | 28933.3 |
| lipopolysaccharide kinase inaa family protein | CD58_RS02420 | Not Available | Positive | 570424 - 571872 | 54357.8 |
| carbamoyltransferase | CD58_RS02425 | Not Available | Positive | 572200 - 573957 | 65464.6 |
| glycosyltransferase | CD58_RS02430 | Not Available | Positive | 573941 - 575071 | 41740.5 |
| antimicrobial resistance protein mig-14 | CD58_RS02435 | Not Available | Positive | 575071 - 575967 | 33414.1 |
| pig-l deacetylase family protein | CD58_RS02440 | Not Available | Positive | 575976 - 577409 | 54055.7 |
| duf6625 family protein | CD58_RS02445 | Not Available | Positive | 577458 - 578342 | 34836.4 |
| glycosyltransferase | CD58_RS02450 | Not Available | Positive | 578339 - 579493 | 43359.6 |
| glycosyltransferase | CD58_RS02455 | Not Available | Positive | 579490 - 580374 | 33643.5 |
| bifunctional o-antigen ligase/aminoglycoside phosphotransferase family protein | CD58_RS02460 | Not Available | Negative | 580446 - 582302 | 69035.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
