Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit alpha | CD58_RS28660 | Not Available | Negative | 6638759 - 6640303 | 55355.4 |
| f0f1 atp synthase subunit delta | CD58_RS28665 | Not Available | Negative | 6640325 - 6640861 | 19442.4 |
| f0f1 atp synthase subunit b | CD58_RS28670 | Not Available | Negative | 6640874 - 6641344 | 16917.4 |
| f0f1 atp synthase subunit c | CD58_RS28675 | Not Available | Negative | 6641403 - 6641660 | 8609.06 |
| f0f1 atp synthase subunit a | CD58_RS28680 | Not Available | Negative | 6641793 - 6642662 | 31672.3 |
| f0f1 atp synthase subunit i | CD58_RS28685 | Not Available | Negative | 6642679 - 6643086 | 14821.8 |
| parb/repb/spo0j family partition protein | CD58_RS28690 | Not Available | Negative | 6643235 - 6644107 | 32081.0 |
| para family protein | CD58_RS28695 | Not Available | Negative | 6644117 - 6644914 | 29076.4 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | CD58_RS28700 | Not Available | Negative | 6644933 - 6645568 | 23321.0 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | CD58_RS28705 | Not Available | Negative | 6645574 - 6647472 | 69208.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
