Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylyltransferase/cytidyltransferase family protein | CD58_RS28610 | Not Available | Positive | 6628366 - 6628923 | 20830.2 |
| nudix hydrolase | CD58_RS28615 | Not Available | Positive | 6628913 - 6629620 | 26102.5 |
| type ii toxin-antitoxin system hipa family toxin | CD58_RS28620 | Not Available | Negative | 6629624 - 6630880 | 47093.6 |
| helix-turn-helix domain-containing protein | CD58_RS28625 | Not Available | Negative | 6630873 - 6631331 | 16545.9 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | CD58_RS28630 | Not Available | Negative | 6631670 - 6633502 | 66611.3 |
| deor/glpr family dna-binding transcription regulator | CD58_RS28635 | Not Available | Negative | 6633504 - 6634280 | 28382.2 |
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | CD58_RS28640 | Not Available | Negative | 6634491 - 6635858 | 48706.4 |
| f0f1 atp synthase subunit epsilon | CD58_RS28645 | Not Available | Negative | 6635973 - 6636398 | 14901.0 |
| f0f1 atp synthase subunit beta | CD58_RS28650 | Not Available | Negative | 6636444 - 6637820 | 49493.3 |
| f0f1 atp synthase subunit gamma | CD58_RS28655 | Not Available | Negative | 6637848 - 6638708 | 31424.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
