Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS28560 | Not Available | Negative | 6615057 - 6617207 | 79012.1 |
| duf3142 domain-containing protein | CD58_RS28565 | Not Available | Negative | 6617194 - 6618387 | 43152.7 |
| glutathione s-transferase family protein | CD58_RS28570 | Not Available | Negative | 6618559 - 6619185 | 22550.1 |
| lysr substrate-binding domain-containing protein | CD58_RS28575 | Not Available | Negative | 6619311 - 6620213 | 32510.2 |
| lta synthase family protein | CD58_RS28580 | Not Available | Positive | 6620539 - 6622752 | 82012.8 |
| gdp-mannose pyrophosphatase nudk | CD58_RS28585 | Not Available | Negative | 6622777 - 6623373 | 22824.9 |
| methyl-accepting chemotaxis protein | CD58_RS28590 | Not Available | Positive | 6623565 - 6625454 | 67799.9 |
| ammonia-dependent nad(+) synthetase | CD58_RS28595 | Not Available | Negative | 6625444 - 6626298 | 30474.5 |
| nicotinate phosphoribosyltransferase | CD58_RS28600 | Not Available | Negative | 6626300 - 6627529 | 47463.2 |
| nicotinamidase | CD58_RS28605 | Not Available | Negative | 6627539 - 6628186 | 23090.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
