Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter permease | CD58_RS28510 | Not Available | Positive | 6601966 - 6602832 | 30302.8 |
| metal abc transporter substrate-binding protein | CD58_RS28515 | Not Available | Positive | 6602844 - 6603719 | 31395.5 |
| duf3617 domain-containing protein | CD58_RS28520 | Not Available | Negative | 6603822 - 6604343 | 18859.7 |
| cardiolipin synthase | CD58_RS28525 | Not Available | Positive | 6604485 - 6605924 | 53807.2 |
| c17 cyclopropane fatty acid synthase cfab | CD58_RS28530 | Not Available | Negative | 6605921 - 6607108 | 44350.7 |
| heavy metal translocating p-type atpase | CD58_RS28535 | Not Available | Negative | 6607293 - 6609209 | 66859.9 |
| protease modulator hflk | CD58_RS28540 | Not Available | Negative | 6609206 - 6610258 | 37397.9 |
| protease modulator hflc | CD58_RS28545 | Not Available | Negative | 6610255 - 6611298 | 37838.8 |
| protease modulator hflk | CD58_RS28550 | Not Available | Negative | 6611295 - 6613256 | 70218.0 |
| dihydrolipoyl dehydrogenase | CD58_RS28555 | Not Available | Positive | 6613479 - 6614879 | 49144.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
