Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative bifunctional diguanylate cyclase/phosphodiesterase | CD58_RS02365 | Not Available | Negative | 552230 - 554923 | 100702.0 |
| alkaline phosphatase d family protein | CD58_RS02370 | Not Available | Negative | 555118 - 556509 | 52648.5 |
| dihydrolipoyllysine-residue acetyltransferase | CD58_RS02375 | Not Available | Negative | 556822 - 558462 | 56047.7 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | CD58_RS02380 | Not Available | Negative | 558474 - 561119 | 99234.2 |
| bifunctional | CD58_RS02385 | Not Available | Positive | 561504 - 564455 | 109940.0 |
| lipopolysaccharide heptosyltransferase ii | CD58_RS02390 | Not Available | Positive | 564920 - 565954 | 38227.3 |
| lipopolysaccharide heptosyltransferase i | CD58_RS02395 | Not Available | Positive | 565956 - 567014 | 39339.9 |
| glycosyltransferase family 4 protein | CD58_RS02400 | Not Available | Positive | 567014 - 568138 | 42158.7 |
| lipopolysaccharide core heptose(i) kinase rfap | CD58_RS02405 | Not Available | Positive | 568135 - 568941 | 30453.1 |
| lipopolysaccharide kinase inaa family protein | CD58_RS02410 | Not Available | Positive | 568941 - 569675 | 28652.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
