Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase | CD58_RS28460 | Not Available | Positive | 6594487 - 6594972 | 18112.6 |
| pyridoxal kinase pdxy | CD58_RS28465 | Not Available | Negative | 6595107 - 6595979 | 31107.9 |
| duf3301 domain-containing protein | CD58_RS28470 | Not Available | Positive | 6596099 - 6596521 | 15959.4 |
| cobw family gtp-binding protein | CD58_RS28475 | Not Available | Negative | 6596534 - 6597499 | 34807.0 |
| hypothetical protein | CD58_RS28480 | Not Available | Positive | 6597527 - 6597880 | 12910.5 |
| duf1826 domain-containing protein | CD58_RS28485 | Not Available | Negative | 6597877 - 6598527 | 23834.8 |
| zinc metallochaperone gtpase ziga | CD58_RS28490 | Not Available | Negative | 6598527 - 6599735 | 45213.8 |
| hypothetical protein | CD58_RS28495 | Not Available | Positive | 6599898 - 6600293 | 14222.7 |
| gtp cyclohydrolase fole2 | CD58_RS28500 | Not Available | Positive | 6600405 - 6601301 | 32488.2 |
| metal abc transporter atp-binding protein | CD58_RS28505 | Not Available | Positive | 6601298 - 6601966 | 24040.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
