Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium-extruding oxaloacetate decarboxylase subunit alpha | CD58_RS28415 | Not Available | Negative | 6579522 - 6581330 | 65493.9 |
| acetyl-coa carboxylase biotin carboxylase subunit | CD58_RS28420 | Not Available | Negative | 6581344 - 6582759 | 51842.2 |
| lysr family transcriptional regulator | CD58_RS28425 | Not Available | Positive | 6582947 - 6583909 | 36024.9 |
| pa3496 family putative envelope integrity protein | CD58_RS29710 | Not Available | Negative | 6583851 - 6584060 | 8214.54 |
| transcriptional regulator hexr | CD58_RS28430 | Not Available | Negative | 6584301 - 6585167 | 31051.7 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | CD58_RS28435 | Not Available | Negative | 6585385 - 6588255 | 107155.0 |
| dna helicase ii | CD58_RS28440 | Not Available | Positive | 6588516 - 6590699 | 81124.5 |
| tim44 domain-containing protein | CD58_RS28445 | Not Available | Positive | 6591004 - 6591879 | 31009.9 |
| smi1/knr4 family protein | CD58_RS28450 | Not Available | Positive | 6592018 - 6592425 | 15566.0 |
| cation:proton antiporter | CD58_RS28455 | Not Available | Negative | 6592446 - 6594209 | 64006.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
