Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fmn-binding negative transcriptional regulator | CD58_RS28370 | Not Available | Positive | 6565648 - 6566289 | 23202.6 |
| gnat family n-acetyltransferase | CD58_RS28375 | Not Available | Positive | 6566292 - 6566738 | 17068.1 |
| gnat family n-acetyltransferase | CD58_RS28380 | Not Available | Positive | 6566749 - 6567435 | 25431.0 |
| metal abc transporter atp-binding protein | CD58_RS31580 | Not Available | Positive | 6567515 - 6567604 | 3055.71 |
| otu domain-containing protein | CD58_RS28385 | Not Available | Negative | 6567617 - 6572983 | 198604.0 |
| homocysteine s-methyltransferase family protein | CD58_RS28390 | Not Available | Negative | 6573281 - 6574180 | 31414.0 |
| abc transporter substrate-binding protein | CD58_RS28395 | Not Available | Positive | 6574295 - 6575116 | 29920.5 |
| amino acid abc transporter permease | CD58_RS28400 | Not Available | Positive | 6575113 - 6575946 | 30518.1 |
| hypothetical protein | CD58_RS28405 | Not Available | Negative | 6576521 - 6576841 | 11116.0 |
| autotransporter domain-containing protein | CD58_RS28410 | Not Available | Positive | 6577281 - 6579452 | 76884.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
