Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparaginase | CD58_RS28325 | Not Available | Positive | 6551888 - 6552892 | 35324.6 |
| arac family transcriptional regulator | CD58_RS28330 | Not Available | Positive | 6553077 - 6554069 | 36889.2 |
| metal abc transporter atp-binding protein | CD58_RS31575 | Not Available | Positive | 6554554 - 6554755 | 7083.42 |
| hypothetical protein | CD58_RS28335 | Not Available | Positive | 6554810 - 6555364 | 20583.6 |
| hypothetical protein | CD58_RS28340 | Not Available | Positive | 6555392 - 6555604 | 7555.13 |
| duf6124 family protein | CD58_RS28345 | Not Available | Positive | 6556360 - 6556716 | 12816.2 |
| histone deacetylase family protein | CD58_RS28350 | Not Available | Positive | 6557051 - 6558082 | 37419.0 |
| polyamine abc transporter substrate-binding protein | CD58_RS28355 | Not Available | Positive | 6558093 - 6559193 | 40512.8 |
| dermonecrotic toxin domain-containing protein | CD58_RS28360 | Not Available | Positive | 6559659 - 6563993 | 163209.0 |
| plp-dependent aminotransferase family protein | CD58_RS28365 | Not Available | Negative | 6563997 - 6565547 | 55368.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
