Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | CD58_RS28275 | Not Available | Negative | 6541221 - 6542519 | 46983.9 |
| acyl-coa thioesterase | CD58_RS28280 | Not Available | Positive | 6542897 - 6543301 | 14471.4 |
| d-hexose-6-phosphate mutarotase | CD58_RS28285 | Not Available | Positive | 6543359 - 6544258 | 33410.5 |
| duf3299 domain-containing protein | CD58_RS28290 | Not Available | Negative | 6544394 - 6544930 | 19461.6 |
| glsb/yeaq/ymge family stress response membrane protein | CD58_RS28295 | Not Available | Negative | 6545019 - 6545264 | 8208.51 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | CD58_RS28300 | Not Available | Negative | 6545367 - 6546452 | 38981.7 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | CD58_RS28305 | Not Available | Negative | 6546465 - 6546956 | 16931.7 |
| lysr substrate-binding domain-containing protein | CD58_RS28310 | Not Available | Negative | 6547290 - 6548207 | 33280.3 |
| aspartate ammonia-lyase | CD58_RS28315 | Not Available | Positive | 6548389 - 6549813 | 51052.0 |
| alanine/glycine:cation symporter family protein | CD58_RS28320 | Not Available | Positive | 6550301 - 6551752 | 52138.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
