Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate regulon transcriptional regulator phob | CD58_RS28225 | Not Available | Positive | 6527931 - 6528620 | 25615.0 |
| phosphate regulon sensor histidine kinase phor | CD58_RS28230 | Not Available | Positive | 6528701 - 6529987 | 48495.9 |
| hemolysin family protein | CD58_RS28235 | Not Available | Positive | 6530111 - 6531451 | 49986.1 |
| peptidoglycan dd-metalloendopeptidase family protein | CD58_RS28240 | Not Available | Negative | 6531611 - 6532507 | 32361.8 |
| response regulator | CD58_RS28245 | Not Available | Negative | 6532726 - 6533685 | 34117.3 |
| phosphate signaling complex protein phou | CD58_RS28250 | Not Available | Negative | 6533858 - 6534619 | 28589.2 |
| phosphate abc transporter atp-binding protein pstb | CD58_RS28255 | Not Available | Negative | 6534733 - 6535566 | 31132.6 |
| phosphate abc transporter permease psta | CD58_RS28260 | Not Available | Negative | 6535734 - 6537404 | 60635.2 |
| abc transporter permease subunit | CD58_RS28265 | Not Available | Negative | 6537420 - 6539453 | 73970.3 |
| phosphate abc transporter substrate-binding protein psts | CD58_RS28270 | Not Available | Negative | 6539933 - 6540931 | 35126.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
