Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ile | Not Available | Not Available | Positive | 6508885 - 6508961 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 6509085 - 6510621 | Not Available |
| metal abc transporter atp-binding protein | CD58_RS28135 | Not Available | Negative | 6511245 - 6512464 | 43669.3 |
| acyl-coa dehydrogenase | CD58_RS28140 | Not Available | Negative | 6512477 - 6513658 | 43202.0 |
| lysr family transcriptional regulator | CD58_RS28145 | Not Available | Positive | 6513815 - 6514711 | 33645.4 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | CD58_RS28150 | Not Available | Positive | 6515146 - 6516267 | 38856.1 |
| nad(p) transhydrogenase subunit alpha | CD58_RS28155 | Not Available | Positive | 6516283 - 6516606 | 11409.6 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit beta | CD58_RS28160 | Not Available | Positive | 6516606 - 6518042 | 49994.3 |
| acetyl-coa hydrolase/transferase family protein | CD58_RS28165 | Not Available | Positive | 6518241 - 6519734 | 53750.9 |
| duf1127 domain-containing protein | CD58_RS28170 | Not Available | Positive | 6520052 - 6520267 | 8389.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
