Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS02315 | Not Available | Positive | 538019 - 538249 | 8345.81 |
| cell division protein zapa | CD58_RS02320 | Not Available | Positive | 538246 - 538548 | 10901.2 |
| acyl-coa dehydrogenase | CD58_RS02325 | Not Available | Negative | 538769 - 540571 | 66313.0 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | CD58_RS02330 | Not Available | Negative | 540815 - 544768 | 142960.0 |
| sodium/proline symporter putp | CD58_RS02335 | Not Available | Positive | 545229 - 546713 | 53017.6 |
| duf2165 family protein | CD58_RS02340 | Not Available | Negative | 546802 - 547296 | 18647.7 |
| type vi secretion system tip protein vgrg | CD58_RS02345 | Not Available | Positive | 547565 - 549622 | 76473.6 |
| duf4123 domain-containing protein | CD58_RS02350 | Not Available | Positive | 549619 - 550350 | 27088.2 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | CD58_RS02355 | Not Available | Positive | 550447 - 551283 | 31650.3 |
| peptide-methionine (s)-s-oxide reductase msra | CD58_RS02360 | Not Available | Negative | 551461 - 552108 | 23602.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
