Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6124 family protein | CD58_RS27925 | Not Available | Positive | 6456826 - 6457206 | 13725.1 |
| type vi secretion system-associated lipoprotein tagq | CD58_RS27930 | Not Available | Negative | 6457579 - 6458517 | 32915.8 |
| formylglycine-generating enzyme family protein | CD58_RS27935 | Not Available | Negative | 6458603 - 6460345 | 63368.2 |
| abc transporter permease | CD58_RS27940 | Not Available | Negative | 6460323 - 6461519 | 42406.4 |
| abc transporter atp-binding protein | CD58_RS27945 | Not Available | Negative | 6461519 - 6462235 | 25433.7 |
| serine/threonine-protein kinase | CD58_RS27950 | Not Available | Negative | 6462235 - 6465336 | 111317.0 |
| pp2c family protein-serine/threonine phosphatase | CD58_RS27955 | Not Available | Negative | 6465333 - 6466064 | 25995.1 |
| type vi secretion system-associated protein tagf | CD58_RS27960 | Not Available | Negative | 6466065 - 6466718 | 23450.9 |
| type vi secretion system membrane subunit tssm | CD58_RS27965 | Not Available | Negative | 6466715 - 6470215 | 129064.0 |
| dotu family type vi secretion system protein | CD58_RS27970 | Not Available | Negative | 6470212 - 6471522 | 47754.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
