Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS27875 | Not Available | Positive | 6445326 - 6446066 | 26191.4 |
| sdr family oxidoreductase | CD58_RS27880 | Not Available | Negative | 6446202 - 6447059 | 30916.4 |
| tonb-system energizer exbb | CD58_RS27885 | Not Available | Positive | 6447247 - 6448230 | 33758.0 |
| tonb system transport protein exbd | CD58_RS27890 | Not Available | Positive | 6448237 - 6448665 | 15340.7 |
| energy transducer tonb | CD58_RS27895 | Not Available | Positive | 6448662 - 6449417 | 27163.2 |
| hydrogen peroxide-inducible genes activator | CD58_RS27900 | Not Available | Positive | 6449742 - 6450662 | 33585.9 |
| atp-dependent dna helicase recg | CD58_RS27905 | Not Available | Positive | 6450672 - 6452747 | 76162.3 |
| aminoacyl-trna deacylase and hdod domain-containing protein | CD58_RS27910 | Not Available | Positive | 6452826 - 6454226 | 51361.1 |
| hypothetical protein | CD58_RS27915 | Not Available | Negative | 6454355 - 6455704 | 47733.8 |
| helicase | CD58_RS27920 | Not Available | Negative | 6456003 - 6456383 | 14290.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
