Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylglutamate kinase | CD58_RS27825 | Not Available | Positive | 6436579 - 6437484 | 31901.2 |
| orotate phosphoribosyltransferase | CD58_RS27830 | Not Available | Negative | 6437677 - 6438321 | 23022.6 |
| exodeoxyribonuclease iii | CD58_RS27835 | Not Available | Positive | 6438404 - 6439183 | 29841.3 |
| duf4870 domain-containing protein | CD58_RS27840 | Not Available | Negative | 6439364 - 6439732 | 13514.9 |
| ribonuclease ph | CD58_RS27845 | Not Available | Negative | 6439763 - 6440485 | 25790.1 |
| yicc/yloc family endoribonuclease | CD58_RS27850 | Not Available | Positive | 6440760 - 6441623 | 32010.5 |
| guanylate kinase | CD58_RS27855 | Not Available | Positive | 6441634 - 6442254 | 23380.7 |
| dna-directed rna polymerase subunit omega | CD58_RS27860 | Not Available | Positive | 6442422 - 6442685 | 9841.61 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | CD58_RS27865 | Not Available | Positive | 6442746 - 6444851 | 78674.7 |
| rida family protein | CD58_RS27870 | Not Available | Positive | 6444889 - 6445269 | 13467.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
